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The evolution of underwater photogrammetry allows to realize 3D models of submerged object and structures throughout the use of rapid and efficient procedures either in terms of data acquisition and data processing. These procedures are based on solutions that are applied using natural control points, signalized markers and tie points; the most common algorithms are based on Structure from Motion (SfM) approach. The limit of these applications is sometimes due to the final accuracy, especially when the goal is a centimeter level of accuracy. This accuracy should be necessary when dealing with a survey devoted to deformation control purposes. An example is the underwater photogrammetry for the determination of coral growth; it is effectively a movement or a deformation detection issue where the geometric change is almost at centimeter or few centimeters accuracy level. When dealing with deformation control applications, a geodetic network is essential to realize a stable and unambiguous reference frame through the accurate and permanent installation of Ground Control Points (GCPs). Such a network, indeed, permits a robust reference frame for the georeferencing of images blocks in the different époques of data acquisition. Therefore, the comparison among subsequent photogrammetric restitutions is based on homogeneous 3D models that have been oriented in the same absolute reference system. The photogrammetric survey is based on a methodological approach especially adapted to underwater biometry (like coral growth determination) and to underwater archaeology. The approach is suitable both for modeling objects of relatively reduced dimensions and for structures with a length of ten meters or more, such as coral barriers, wrecks and long walls. The paper describes underwater photogrammetric surveys on sites at different extensions, the geodetic GCPs reference network installation and measurements (distance and elevation difference observations) as well as preliminary results of the network adjustment. A brief description of image acquisition at a different scales and the resulting 3D model of first campaign are also shown.